Image analysis
The core supports image processing and data analysis with Imaris on the Mammoth workstation in room 327, ImageScope, ImageJ and FIJI, and OlyVia, plus a workstation of the Gladstone Institute of Cardiovascular Disease.
You provide
- Tissue or samplesFixed or frozen
- Protocol, sample list or earlier images
Request this service
Histology and Light Microscopy Core replies with scope and price.
Your details
Your lab
Find your lab
Join your lab to use its details for future bookings and requests.
Nothing is booked or charged until you accept a quote.
You receive
- Time on the Mammoth Imaris workstation
- Help processing and analyzing your images
How it goes
You ask
Answer a few questions about your samples.
They scope it
The facility confirms it can be done and may ask for a detail or two.
You accept a quote
Price and timing, agreed before any work starts.
Results come back
Files arrive in your requests, with a note from the facility.
Where it's been used
Confocal imaging and Imaris 3D tracing of microglia branches in brain sections from a mouse model of tau pathology.
Microglial microRNAs mediate sex-specific responses to tau pathology
Kodama, Guzman, Etchegaray, et al. · Nature Neuroscience · 2019
Whole-section scans, confocal imaging and Imaris analysis of microglia shape and spacing as they repopulate the adult mouse brain.
Proximal recolonization by self-renewing microglia re-establishes microglial homeostasis in the adult mouse brain
Zhan, Krabbe, Du, et al. · PLOS Biology · 2018
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